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tldr/pages/linux/obabel.md
Vitor Henrique e7d5609dd3
pages*: improve list placeholders and wording of descriptions (#12111)
* pages*: improve wording and list placeholders

* clamav: fix verb tenses

Co-authored-by: Juri Dispan <juri.dispan@posteo.net>

* buzzphrase: use k instead of n for number of phrases

Co-authored-by: Juri Dispan <juri.dispan@posteo.net>

* adguardhome: use non-default instead of different

* adguardhome: use configuration instead of config

Co-authored-by: K.B.Dharun Krishna <kbdharunkrishna@gmail.com>

* goimports, module: fix list placeholders

Co-authored-by: K.B.Dharun Krishna <kbdharunkrishna@gmail.com>

* pages*: leave stems and extensions in the same placeholders

* pages*: fix list placeholders

* pages*: fix list placeholders

* pages*: apply suggestions from code review

Co-authored-by: Lena <126529524+acuteenvy@users.noreply.github.com>

* qpdf: enclose n with backticks

Co-authored-by: Lena <126529524+acuteenvy@users.noreply.github.com>

---------

Co-authored-by: Juri Dispan <juri.dispan@posteo.net>
Co-authored-by: K.B.Dharun Krishna <kbdharunkrishna@gmail.com>
Co-authored-by: Lena <126529524+acuteenvy@users.noreply.github.com>
2024-01-31 09:25:19 +05:30

579 B

obabel

Translate chemistry-related data. More information: https://openbabel.org/wiki/Main_Page.

  • Convert a .mol file to XYZ coordinates:

obabel {{path/to/file.mol}} -O {{path/to/output_file.xyz}}

  • Convert a SMILES string to a 500x500 picture:

obabel -:"{{SMILES}} -O {{path/to/output_file.png}} -xp 500

  • Convert a file of SMILES string to separate 3D .mol files:

obabel {{path/to/file.smi}} -O {{path/to/output_file.mol}} --gen3D -m

  • Render multiple inputs into one picture:

obabel {{path/to/file1 path/to/file2 ...}} -O {{path/to/output_file.png}}