diff --git a/core/org.eclipse.cdt.ui.tests/ui/org/eclipse/cdt/ui/tests/refactoring/rename/RenameMoveHeaderRefactoringTest.java b/core/org.eclipse.cdt.ui.tests/ui/org/eclipse/cdt/ui/tests/refactoring/rename/RenameMoveHeaderRefactoringTest.java
index 3569960ec4f..cab94c97026 100644
--- a/core/org.eclipse.cdt.ui.tests/ui/org/eclipse/cdt/ui/tests/refactoring/rename/RenameMoveHeaderRefactoringTest.java
+++ b/core/org.eclipse.cdt.ui.tests/ui/org/eclipse/cdt/ui/tests/refactoring/rename/RenameMoveHeaderRefactoringTest.java
@@ -295,9 +295,13 @@ public class RenameMoveHeaderRefactoringTest extends RefactoringTestBase {
 
 	// OriginalClass.cpp
 	//#include "OriginalClass.h"
+	//
+	//#include <cstdio>
 	//====================
 	// RenamedClass.cpp
 	//#include "RenamedClass.h"
+	//
+	//#include <cstdio>
 
 	// OriginalClass_test.cpp
 	//#include "OriginalClass.h"
diff --git a/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/corext/codemanipulation/InclusionContext.java b/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/corext/codemanipulation/InclusionContext.java
index aace2938f31..37ff79e2ad3 100644
--- a/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/corext/codemanipulation/InclusionContext.java
+++ b/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/corext/codemanipulation/InclusionContext.java
@@ -48,9 +48,11 @@ public class InclusionContext {
 	private final IncludePreferences fPreferences;
 	private String fSourceContents;
 	private String fLineDelimiter;
+	private IPath fTuLocation;
 
 	public InclusionContext(ITranslationUnit tu) {
 		fTu = tu;
+		fTuLocation = fTu.getLocation();
 		ICProject cProject = fTu.getCProject();
 		fProject = cProject.getProject();
 		fCurrentDirectory = fTu.getResource().getParent().getLocation();
@@ -245,7 +247,7 @@ public class InclusionContext {
 	 * used for test files.
 	 */
 	public boolean isPartnerFile(IPath path) {
-		return SourceHeaderPartnerFinder.isPartnerFile(getTranslationUnit().getLocation(), path,
+		return SourceHeaderPartnerFinder.isPartnerFile(getTranslationUnitLocation(), path,
 				fPreferences.partnerFileSuffixes);
 	}
 
@@ -292,4 +294,21 @@ public class InclusionContext {
 		}
 		return fLineDelimiter;
 	}
+
+	/**
+	 * Sets the effective translation unit location that overrides the default value obtained by
+	 * calling {@code getTranslationUnit().getLocation()}.
+	 *
+	 * @param location the file system location to set 
+	 */
+	public void setTranslationUnitLocation(IPath location) {
+		this.fTuLocation = location;
+	}
+
+	/**
+	 * Returns the effective translation unit location.
+	 */
+	public IPath getTranslationUnitLocation() {
+		return fTuLocation;
+	}
 }
\ No newline at end of file
diff --git a/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/ui/refactoring/rename/HeaderFileReferenceAdjuster.java b/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/ui/refactoring/rename/HeaderFileReferenceAdjuster.java
index f87ce5c3c74..388d72492c4 100644
--- a/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/ui/refactoring/rename/HeaderFileReferenceAdjuster.java
+++ b/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/ui/refactoring/rename/HeaderFileReferenceAdjuster.java
@@ -208,6 +208,11 @@ public class HeaderFileReferenceAdjuster {
 	private TextEdit createEdit(IASTTranslationUnit ast, ITranslationUnit tu, IProgressMonitor pm)
 			throws CoreException, OperationCanceledException {
 		IncludeCreationContext context = new IncludeCreationContext(tu, index);
+		// Adjust the translation unit location in the inclusion context.
+		IFile movedFile = movedFiles.get(tu.getFile());
+		if (movedFile != null)
+			context.setTranslationUnitLocation(movedFile.getLocation());
+
 		String contents = context.getSourceContents();
 
 		MultiTextEdit rootEdit = createIncludeGuardEdit(ast, tu, contents);
@@ -353,7 +358,7 @@ public class HeaderFileReferenceAdjuster {
 				} else {
 					if (previousInclude != null && affectedIncludes.containsKey(previousInclude.getExistingInclude()) &&
 							isBlankLineNeededBetween(previousInclude, include, preferences) &&
-							TextUtil.findBlankLine(contents, offset, ASTNodes.offset(existingInclude)) < 0) {
+							TextUtil.findBlankLine(contents, skipDeletedRegion(offset, deletes), ASTNodes.offset(existingInclude)) < 0) {
 						text.append(context.getLineDelimiter());
 					}
 					flushEditBuffer(offset, text, deletes, rootEdit);
@@ -434,6 +439,15 @@ public class HeaderFileReferenceAdjuster {
 		}
 	}
 
+	private int skipDeletedRegion(int offset, Deque<DeleteEdit> deletes) {
+		for (DeleteEdit edit : deletes) {
+			if (edit.getOffset() > offset)
+				break;
+			offset = edit.getExclusiveEnd();
+		}
+		return offset;
+	}
+
 	private void lockIndex() throws CoreException, OperationCanceledException {
 		if (indexLockCount == 0) {
 			if (index == null) {